Detailed information of evm.model.Chr02.1576 in Hemicorallium imperiale

Genomic Location: Chr02:42023419...42136508
NR annotation: XP_028403858.1, mucin-2-like isoform X3 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2PC93SCO-spondin OS=Gallus gallus OX=9031 GN=SSPO PE=2 SV=1
Q28833von Willebrand factor (Fragment) OS=Sus scrofa OX=9823 GN=VWF PE=2 SV=2
A2VEC9SCO-spondin OS=Homo sapiens OX=9606 GN=SSPOP PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01826TILTrypsin Inhibitor like cysteine rich domainDomainInterproscan
PF00093VWCvon Willebrand factor type C domainDomainInterproscan
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF00094VWDvon Willebrand factor type D domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001007DomainVWFC domainInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR036084Homologous_superfamilySerine protease inhibitor-like superfamilyInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR002919DomainTrypsin Inhibitor-like, cysteine rich domainInterproscan
IPR050780FamilyMucin/von Willebrand/Thrombospondin superfamilyInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR014853DomainVWF/SSPO/Zonadhesin-like, cysteine-rich domainInterproscan
IPR006207DomainCystine knot, C-terminalInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11339EXTRACELLULAR MATRIX GLYCOPROTEIN RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan

TOP