Detailed information of evm.model.Chr02.1665 in Hemicorallium imperiale

Genomic Location: Chr02:44851681...44883810
NR annotation: CAH3132857.1, unnamed protein product [Pocillopora meandrina]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr02.1665 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A3DH97Anti-sigma-I factor RsgI6 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=rsgI6 PE=1 SV=1
F4JG10Endo-1,4-beta-xylanase 3 OS=Arabidopsis thaliana OX=3702 GN=XYN3 PE=2 SV=1
Q680B7Endo-1,4-beta-xylanase 4 OS=Arabidopsis thaliana OX=3702 GN=XYN4 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004413 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02018
all species →		CBM_4_9Carbohydrate binding domainDomainInterproscan
PF00331
all species →		Glyco_hydro_10Glycosyl hydrolase family 10DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001000
all species →		DomainGlycoside hydrolase family 10 domainInterproscan
IPR003305
all species →		DomainCarbohydrate-binding, CenC-likeInterproscan
IPR008979
all species →		Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR044846
all species →		FamilyGlycoside hydrolase family 10Interproscan
IPR017853
all species →		Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31490
all species →		GLYCOSYL HYDROLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004553
all species →		Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0005975
all species →		Biological Processcarbohydrate metabolic processInterproscan
GO:0016798
all species →		Molecular Functionhydrolase activity, acting on glycosyl bondsInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr02.1665.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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