Detailed information of evm.model.Chr02.169 in Hemicorallium imperiale

Genomic Location: Chr02:4385801...4391001
NR annotation: CAB3996778.1, doublesex- and mab-3-related transcription factor A1 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q76L87Doublesex- and mab-3-related transcription factor A2 OS=Oryzias latipes OX=8090 GN=dmrta2 PE=3 SV=1
Q19291Doublesex- and mab-3-related transcription factor dmd-5 OS=Caenorhabditis elegans OX=6239 GN=dmd-5 PE=1 SV=2
Q2I327Doublesex- and mab-3-related transcription factor A2 OS=Xiphophorus maculatus OX=8083 GN=dmrta2 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyDM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00751DMDM DNA binding domainFamilyInterproscan
PF03474DMADMRTA motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001275DomainDM DNA-binding domainInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR036407Homologous_superfamilyDM DNA-binding domain superfamilyInterproscan
IPR026607FamilyDMRT familyInterproscan
IPR005173DomainDMRTA motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12322DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRTInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007548Biological Processsex differentiationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19491DMRT4_5, DMRTA; doublesex- and mab-3-related transcription factor 4/5-Transcription factorsko03000deepkoala

TOP