Detailed information of evm.model.Chr02.1704 in Hemicorallium imperiale

Genomic Location: Chr02:46461949...46504332
NR annotation: CAB4035309.1, prolyl 3-hydroxylase OGFOD1-like [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr02.1704 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6DE73Prolyl 3-hydroxylase OGFOD1 OS=Xenopus laevis OX=8355 GN=ogfod1 PE=2 SV=1
Q3MI03Prolyl 3-hydroxylase OGFOD1 OS=Bos taurus OX=9913 GN=OGFOD1 PE=2 SV=2
Q8N543Prolyl 3-hydroxylase OGFOD1 OS=Homo sapiens OX=9606 GN=OGFOD1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004011 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10637
all species →		Ofd1_CTDDOxoglutarate and iron-dependent oxygenase degradation C-termDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019601
all species →		DomainOxoglutarate/iron-dependent oxygenase, C-terminal degradation domainInterproscan
IPR051842
all species →		FamilyRibosomal subunit uS12 prolyl hydroxylaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12117
all species →		HISTONE ACETYLTRANSFERASE COMPLEXInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005506
all species →		Molecular Functioniron ion bindingInterproscan
GO:0016706
all species →		Molecular Function2-oxoglutarate-dependent dioxygenase activityInterproscan
GO:0031418
all species →		Molecular FunctionL-ascorbic acid bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006449
all species →		Biological Processregulation of translational terminationInterproscan
GO:0019511
all species →		Biological Processpeptidyl-proline hydroxylationInterproscan
GO:0031543
all species →		Molecular Functionpeptidyl-proline dioxygenase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr02.1704.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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