Gene detail

Detailed information of evm.model.Chr02.1727 in Hemicorallium imperiale

Genomic Location: Chr02:48201923...48204673
NR annotation: XP_046846976.1, homeobox protein Hox-D3-like [Xenia sp. Carnegie-2017]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P31249	Homeobox protein Hox-D3 OS=Homo sapiens OX=9606 GN=HOXD3 PE=1 SV=3
P23682	Homeobox protein Hox-B3 OS=Gallus gallus OX=9031 GN=HOXB3 PE=2 SV=2
Q3V5Z9	Homeobox protein Hox-D3 OS=Oryzias latipes OX=8090 GN=hoxd3a PE=3 SV=1

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001356	Domain	Homeobox domain	Interproscan
IPR020479	Domain	Homeobox domain, metazoa	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45664	PROTEIN ZERKNUELLT 1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09303	HOX_3; homeobox protein HoxA/B/D3	-	Transcription factors	ko03000	deepkoala