Detailed information of evm.model.Chr02.1741 in Hemicorallium imperiale

Genomic Location: Chr02:48470361...48481304
NR annotation: XP_028405404.1, speckle targeted PIP5K1A-regulated poly(A) polymerase-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr02.1741 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004687 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06220
all species →
zf-U1U1 zinc fingerDomainInterproscan
PF00076
all species →
RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000690
all species →
DomainMatrin/U1-C, C2H2-type zinc fingerInterproscan
IPR013085
all species →
DomainU1-C, C2H2-type zinc fingerInterproscan
IPR000504
all species →
DomainRNA recognition motif domainInterproscan
IPR035979
all species →
Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677
all species →
Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR036236
all species →
Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan

 PANTHER
No PANTHER signature was detected for evm.model.Chr02.1741. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr02.1741.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP