Genomic Location: Chr02:50145849...50176474
NR annotation: XP_028393325.1, 72 kDa type IV collagenase-like isoform X1 [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families
evm.model.Chr02.1804 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q9R0S2 | Matrix metalloproteinase-24 OS=Mus musculus OX=10090 GN=Mmp24 PE=1 SV=2 |
| Q99PW6 | Matrix metalloproteinase-24 OS=Rattus norvegicus OX=10116 GN=Mmp24 PE=1 SV=1 |
| Q9Y5R2 | Matrix metalloproteinase-24 OS=Homo sapiens OX=9606 GN=MMP24 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0012502 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01471 all species → | PG_binding_1 | Putative peptidoglycan binding domain | Domain | Interproscan |
| PF00413 all species → | Peptidase_M10 | Matrixin | Domain | Interproscan |
| PF02223 all species → | Thymidylate_kin | Thymidylate kinase | Domain | Interproscan |
| PF00045 all species → | Hemopexin | Hemopexin | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002477 all species → | Domain | Peptidoglycan binding-like | Interproscan |
| IPR036365 all species → | Homologous_superfamily | PGBD-like superfamily | Interproscan |
| IPR036375 all species → | Homologous_superfamily | Hemopexin-like domain superfamily | Interproscan |
| IPR018487 all species → | Repeat | Hemopexin-like repeats | Interproscan |
| IPR001818 all species → | Domain | Peptidase M10, metallopeptidase | Interproscan |
| IPR033739 all species → | Domain | Peptidase M10A, catalytic domain | Interproscan |
| IPR039430 all species → | Domain | Thymidylate kinase-like domain | Interproscan |
| IPR006026 all species → | Domain | Peptidase, metallopeptidase | Interproscan |
| IPR018486 all species → | Conserved_site | Hemopexin, conserved site | Interproscan |
| IPR021190 all species → | Family | Peptidase M10A | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR000585 all species → | Domain | Hemopexin-like domain | Interproscan |
| IPR024079 all species → | Homologous_superfamily | Metallopeptidase, catalytic domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10201 all species → | MATRIX METALLOPROTEINASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004222 all species → | Molecular Function | metalloendopeptidase activity | Interproscan |
| GO:0006508 all species → | Biological Process | proteolysis | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| GO:0031012 all species → | Cellular Component | extracellular matrix | Interproscan |
| GO:0008237 all species → | Molecular Function | metallopeptidase activity | Interproscan |
| GO:0030198 all species → | Biological Process | extracellular matrix organization | Interproscan |
| GO:0030574 all species → | Biological Process | collagen catabolic process | Interproscan |
evm.model.Chr02.1804.
