Detailed information of evm.model.Chr02.1821 in Hemicorallium imperiale

Genomic Location: Chr02:50500717...50504167
NR annotation: XP_028403798.1, nucleic acid dioxygenase ALKBH1-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr02.1821 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q13686Nucleic acid dioxygenase ALKBH1 OS=Homo sapiens OX=9606 GN=ALKBH1 PE=1 SV=2
P0CB42Nucleic acid dioxygenase ALKBH1 OS=Mus musculus OX=10090 GN=Alkbh1 PE=1 SV=1
Q54N08Alpha-ketoglutarate-dependent dioxygenase alkB OS=Dictyostelium discoideum OX=44689 GN=alkB PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003429 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13532
all species →		2OG-FeII_Oxy_22OG-Fe(II) oxygenase superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037151
all species →		Homologous_superfamilyAlpha-ketoglutarate-dependent dioxygenase AlkB-like superfamilyInterproscan
IPR027450
all species →		DomainAlpha-ketoglutarate-dependent dioxygenase AlkB-likeInterproscan
IPR005123
all species →		DomainOxoglutarate/iron-dependent dioxygenaseInterproscan
IPR004574
all species →		FamilyAlkylated DNA repair protein AlkBInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16557
all species →		ALKYLATED DNA REPAIR PROTEIN ALKB-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0008198
all species →		Molecular Functionferrous iron bindingInterproscan
GO:0035513
all species →		Biological Processoxidative RNA demethylationInterproscan
GO:0035515
all species →		Molecular Functionoxidative RNA demethylase activityInterproscan
GO:0035516
all species →		Molecular Functionbroad specificity oxidative DNA demethylase activityInterproscan
GO:0035552
all species →		Biological Processobsolete oxidative single-stranded DNA demethylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr02.1821.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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