Detailed information of evm.model.Chr02.1960 in Hemicorallium imperiale

Genomic Location: Chr02:54055687...54065699
NR annotation: CAB3978893.1, matrilin-3-like isoform X2 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8NFW1Collagen alpha-1(XXII) chain OS=Homo sapiens OX=9606 GN=COL22A1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF00095WAPWAP-type (Whey Acidic Protein) 'four-disulfide core'DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR036645Homologous_superfamilyElafin-like superfamilyInterproscan
IPR008197DomainWAP-type 'four-disulfide core' domainInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0030414Molecular Functionpeptidase inhibitor activityInterproscan

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