Detailed information of evm.model.Chr02.1974 in Hemicorallium imperiale

Genomic Location: Chr02:54296653...54336008
NR annotation: XP_028398715.1, GATOR complex protein MIOS-B-like isoform X1 [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr02.1974 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A4QNS7GATOR2 complex protein MIOS-B OS=Xenopus laevis OX=8355 GN=mios-b PE=2 SV=1
Q5U5D4GATOR2 complex protein MIOS-A OS=Xenopus laevis OX=8355 GN=mios-a PE=2 SV=1
Q8VE19GATOR2 complex protein MIOS OS=Mus musculus OX=10090 GN=Mios PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002871 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21720
all species →		MIOS_WD40MIOS, WD40 repeatRepeatInterproscan
PF17034
all species →		zinc_ribbon_16Zinc-ribbon like familyFamilyInterproscan
PF21719
all species →		MIOS_a-solMIOS, alpha-solenoidRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037593
all species →		FamilyMIOS/Sea4Interproscan
IPR031488
all species →		DomainGATOR2 complex protein MIO, zinc-ribbon like domainInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR049092
all species →		DomainMIOS-like, alpha-solenoid domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16453
all species →		WD40 DOMAIN-CONTAINING PROTEIN MIO FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0034198
all species →		Biological Processcellular response to amino acid starvationInterproscan
GO:1904263
all species →		Biological Processpositive regulation of TORC1 signalingInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K20407MIOS, MIO, SEA4; SEA/GATOR complex protein SEA4/MIOS-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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