Detailed information of evm.model.Chr02.1975 in Hemicorallium imperiale

Genomic Location: Chr02:54446861...54449258
NR annotation: XP_028397042.1, replication protein A 14 kDa subunit-like isoform X1 [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr02.1975 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009092 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08661
all species →		Rep_fac-A_3Replication factor A protein 3DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013970
all species →		FamilyReplication factor A protein 3Interproscan
IPR012340
all species →		Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15114
all species →		REPLICATION PROTEIN A3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006260
all species →		Biological ProcessDNA replicationInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0006310
all species →		Biological ProcessDNA recombinationInterproscan
GO:0000724
all species →		Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0003684
all species →		Molecular Functiondamaged DNA bindingInterproscan
GO:0003697
all species →		Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0005662
all species →		Cellular ComponentDNA replication factor A complexInterproscan
GO:0006284
all species →		Biological Processbase-excision repairInterproscan
GO:0006289
all species →		Biological Processnucleotide-excision repairInterproscan
GO:0006298
all species →		Biological Processmismatch repairInterproscan
GO:0035861
all species →		Cellular Componentsite of double-strand breakInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10740RPA3; replication factor A3-DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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