Detailed information of evm.model.Chr02.2052 in Hemicorallium imperiale

Genomic Location: Chr02:55991027...55998331
NR annotation: CAB3982439.1, C21orf2-like isoform X2 [Paramuricea clavata]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr02.2052 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8C6G1Cilia- and flagella-associated protein 410 OS=Mus musculus OX=10090 GN=Cfap410 PE=1 SV=1
O43822Cilia- and flagella-associated protein 410 OS=Homo sapiens OX=9606 GN=CFAP410 PE=1 SV=1
P34390Uncharacterized protein F09G8.5 OS=Caenorhabditis elegans OX=6239 GN=F09G8.5 PE=4 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006545 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19252
all species →
HINDHIND motifMotifInterproscan
PF14580
all species →
LRR_9Leucine-rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045347
all species →
Conserved_siteHIND motifInterproscan
IPR032675
all species →
Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001611
all species →
RepeatLeucine-rich repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18849
all species →
LEUCINE RICH REPEAT PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000398
all species →
Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0046540
all species →
Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K23456CFAP410, C21ORF2; cilla- and flagella-associated protein-Cilium and associated proteinsko03037deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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