Gene detail

Detailed information of evm.model.Chr02.2121 in Hemicorallium imperiale

Genomic Location: Chr02:57331199...57367200
NR annotation: CAB3979361.1, LIM and SH3 domain 1-like [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q3B7M5	LIM and SH3 domain protein 1 OS=Bos taurus OX=9913 GN=LASP1 PE=2 SV=1
Q99MZ8	LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1
Q5R5W0	LIM and SH3 domain protein 1 OS=Pongo abelii OX=9601 GN=LASP1 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|SH3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00880	Nebulin	Nebulin repeat	Repeat	Interproscan
PF00018	SH3_1	SH3 domain	Domain	Interproscan
PF00412	LIM	LIM domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000900	Repeat	Nebulin repeat	Interproscan
IPR001452	Domain	SH3 domain	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR001781	Domain	Zinc finger, LIM-type	Interproscan
IPR051759	Family	LIM and SH3 domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46218	LASP	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005925	Cellular Component	focal adhesion	Interproscan
GO:0051015	Molecular Function	actin filament binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24420	LASP1; LIM and SH3 domain protein 1	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala