Detailed information of evm.model.Chr02.2271 in Hemicorallium imperiale

Genomic Location: Chr02:61610439...61618330
NR annotation: XP_046847221.1, chromobox protein homolog 1-like [Xenia sp. Carnegie-2017]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr02.2271 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P23198Chromobox protein homolog 3 OS=Mus musculus OX=10090 GN=Cbx3 PE=1 SV=2
Q13185Chromobox protein homolog 3 OS=Homo sapiens OX=9606 GN=CBX3 PE=1 SV=4
Q5R6X7Chromobox protein homolog 3 OS=Pongo abelii OX=9601 GN=CBX3 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002073 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01393
all species →		Chromo_shadowChromo shadow domainDomainInterproscan
PF00385
all species →		ChromoChromo (CHRromatin Organisation MOdifier) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008251
all species →		DomainChromo shadow domainInterproscan
IPR017984
all species →		DomainChromo domain subgroupInterproscan
IPR051219
all species →		FamilyHeterochromatin-associated chromo domain-containing proteinInterproscan
IPR000953
all species →		DomainChromo/chromo shadow domainInterproscan
IPR016197
all species →		Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR023780
all species →		DomainChromo domainInterproscan
IPR023779
all species →		Conserved_siteChromo domain, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22812
all species →		CHROMOBOX PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0000122
all species →		Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0003682
all species →		Molecular Functionchromatin bindingInterproscan
GO:0005721
all species →		Cellular Componentpericentric heterochromatinInterproscan
GO:0006325
all species →		Biological Processchromatin organizationInterproscan
GO:0035064
all species →		Molecular Functionmethylated histone bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr02.2271.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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