Detailed information of evm.model.Chr02.2280 in Hemicorallium imperiale

Genomic Location: Chr02:61802930...61809954
NR annotation: XP_028398606.1, NGFI-A-binding protein 1-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr02.2280 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q61122NGFI-A-binding protein 1 OS=Mus musculus OX=10090 GN=Nab1 PE=1 SV=2
Q13506NGFI-A-binding protein 1 OS=Homo sapiens OX=9606 GN=NAB1 PE=1 SV=2
Q62722NGFI-A-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Nab1 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009825 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04904
all species →		NCD1NAB conserved region 1 (NCD1)DomainInterproscan
PF04905
all species →		NCD2NAB conserved region 2 (NCD2)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013761
all species →		Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR006988
all species →		DomainNab, N-terminalInterproscan
IPR039040
all species →		FamilyNAB familyInterproscan
IPR038398
all species →		Homologous_superfamilyNAB co-repressor domain 2 superfamilyInterproscan
IPR006989
all species →		DomainNAB co-repressor, domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12623
all species →		NGFI-A BINDING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003712
all species →		Molecular Functiontranscription coregulator activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008134
all species →		Molecular Functiontranscription factor bindingInterproscan
GO:0045892
all species →		Biological Processnegative regulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr02.2280.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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