Detailed information of evm.model.Chr02.229 in Hemicorallium imperiale

Genomic Location: Chr02:5814499...5834571
NR annotation: XP_028412972.1, general transcription factor 3C polypeptide 1-like [Dendronephthya gigantea]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr02.229 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8K284General transcription factor 3C polypeptide 1 OS=Mus musculus OX=10090 GN=Gtf3c1 PE=1 SV=2
Q63505General transcription factor 3C polypeptide 1 OS=Rattus norvegicus OX=10116 GN=Gtf3c1 PE=1 SV=1
Q12789General transcription factor 3C polypeptide 1 OS=Homo sapiens OX=9606 GN=GTF3C1 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001719 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04182
all species →
B-block_TFIIICB-block binding subunit of TFIIICFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007309
all species →
DomainB-block binding subunit of TFIIICInterproscan
IPR035625
all species →
DomainTfc3-like, extended winged-helix domainInterproscan
IPR044210
all species →
FamilyTranscription facto Tfc3-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15180
all species →
GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000127
all species →
Cellular Componenttranscription factor TFIIIC complexInterproscan
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0006384
all species →
Biological Processtranscription initiation at RNA polymerase III promoterInterproscan
GO:0042791
all species →
Biological Process5S class rRNA transcription by RNA polymerase IIIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr02.229.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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