Detailed information of evm.model.Chr02.246 in Hemicorallium imperiale

Genomic Location: Chr02:6183646...6201673
NR annotation: XP_028401158.1, ubiquitin carboxyl-terminal hydrolase MINDY-3-like [Dendronephthya gigantea]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr02.246 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0IIH8Ubiquitin carboxyl-terminal hydrolase MINDY-3 OS=Bos taurus OX=9913 GN=MINDY3 PE=2 SV=1
Q6NX27Ubiquitin carboxyl-terminal hydrolase MINDY-3 OS=Xenopus tropicalis OX=8364 GN=mindy3 PE=2 SV=1
Q9H8M7Ubiquitin carboxyl-terminal hydrolase MINDY-3 OS=Homo sapiens OX=9606 GN=MINDY3 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008250 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13898
all species →
MINDY-3_4_CDDeubiquitinating enzyme MINDY-3/4, conserved domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002048
all species →
DomainEF-hand domainInterproscan
IPR011992
all species →
Homologous_superfamilyEF-hand domain pairInterproscan
IPR025257
all species →
DomainDeubiquitinating enzyme MINDY-3/4, conserved domainInterproscan
IPR039785
all species →
FamilyDeubiquitinating enzyme MINDY-3/4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12473
all species →
UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0004843
all species →
Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0071108
all species →
Biological Processprotein K48-linked deubiquitinationInterproscan
GO:1990380
all species →
Molecular FunctionK48-linked deubiquitinase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr02.246.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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