Gene detail

Detailed information of evm.model.Chr02.29 in Hemicorallium imperiale

Genomic Location: Chr02:617664...722559
NR annotation: CAB4007043.1, low-density lipo receptor-related 4 isoform X1 [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P35952	Low-density lipoprotein receptor OS=Rattus norvegicus OX=10116 GN=Ldlr PE=1 SV=1
P35950	Low-density lipoprotein receptor OS=Cricetulus griseus OX=10029 GN=LDLR PE=3 SV=2
Q9NZR2	Low-density lipoprotein receptor-related protein 1B OS=Homo sapiens OX=9606 GN=LRP1B PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00058	Ldl_recept_b	Low-density lipoprotein receptor repeat class B	Repeat	Interproscan
PF14670	FXa_inhibition	Coagulation Factor Xa inhibitory site	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011042	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan
IPR000033	Repeat	LDLR class B repeat	Interproscan
IPR051221	Family	Low-density lipoprotein receptor-related	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22722	LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006898	Biological Process	receptor-mediated endocytosis	Interproscan
GO:0016324	Cellular Component	apical plasma membrane	Interproscan
GO:0042562	Molecular Function	hormone binding	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan