Detailed information of evm.model.Chr02.305 in Hemicorallium imperiale

Genomic Location: Chr02:7136103...7205921
NR annotation: XP_028413717.1, uncharacterized protein LOC114536572 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7Z442Polycystin-1-like protein 2 OS=Homo sapiens OX=9606 GN=PKD1L2 PE=1 SV=5
Q7TN88Polycystin-1-like protein 2 OS=Mus musculus OX=10090 GN=Pkd1l2 PE=2 SV=1
Q2EG98Polycystin-1-like protein 3 OS=Mus musculus OX=10090 GN=Pkd1l3 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01825GPSGPCR proteolysis site, GPS, motif MotifInterproscan
PF02010REJREJ domainFamilyInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF02140Gal_LectinGalactose binding lectin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR000519DomainP-type trefoil domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR043159Homologous_superfamilyD-galactoside/L-rhamnose binding SUEL lectin domain superfamilyInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR035986Homologous_superfamilyPKD domain superfamilyInterproscan
IPR000601DomainPKD domainInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR044913Homologous_superfamilyP-type trefoil domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR051223FamilyPolycystinInterproscan
IPR014010DomainREJ domainInterproscan
IPR000922DomainD-galactoside/L-rhamnose binding SUEL lectin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0050982Biological Processdetection of mechanical stimulusInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan

TOP