Detailed information of evm.model.Chr02.306 in Hemicorallium imperiale

Genomic Location: Chr02:7213146...7233018
NR annotation: CAB4016154.1, homeobox GBX-2-like [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr02.306 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q91907Homeobox protein GBX-2 OS=Xenopus laevis OX=8355 GN=gbx2 PE=2 SV=1
Q28ZA9Homeobox protein unplugged OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=unpg PE=3 SV=1
O42230Homeobox protein GBX-2 OS=Gallus gallus OX=9031 GN=GBX2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000082 (this species only)
Transcription factor familyHomeobox · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046
all species →		HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017970
all species →		Conserved_siteHomeobox, conserved siteInterproscan
IPR020479
all species →		DomainHomeobox domain, metazoaInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR042982
all species →		FamilyHomeobox protein GBX-1/2Interproscan
IPR001356
all species →		DomainHomeobox domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24334
all species →		HOMEOBOX PROTEIN GBXInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0000977
all species →		Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0051960
all species →		Biological Processregulation of nervous system developmentInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr02.306.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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