Detailed information of evm.model.Chr02.398 in Hemicorallium imperiale

Genomic Location: Chr02:9405268...9419427
NR annotation: XP_028407223.1, E3 ubiquitin-protein ligase UHRF1-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr02.398 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
J9VHE9UHRF1-like protein OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) OX=235443 GN=UHF1 PE=3 SV=2
Q96T88E3 ubiquitin-protein ligase UHRF1 OS=Homo sapiens OX=9606 GN=UHRF1 PE=1 SV=1
Q7TPK1E3 ubiquitin-protein ligase UHRF1 OS=Rattus norvegicus OX=10116 GN=Uhrf1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001761 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02182
all species →		SAD_SRASAD/SRA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003105
all species →		DomainSRA-YDGInterproscan
IPR015947
all species →		Homologous_superfamilyPUA-like superfamilyInterproscan
IPR036987
all species →		Homologous_superfamilySRA-YDG superfamilyInterproscan
IPR045134
all species →		FamilyUHRF1/2-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14140
all species →		E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0010216
all species →		Biological Processobsolete negative regulation of gene expression via chromosomal DNA cytosine methylationInterproscan
GO:0016567
all species →		Biological Processprotein ubiquitinationInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10638UHRF1, NP95; E3 ubiquitin-protein ligase UHRF1EC:2.3.2.27
Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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