Detailed information of evm.model.Chr02.399 in Hemicorallium imperiale

Genomic Location: Chr02:9420380...9443881
NR annotation: XP_028415801.1, polynucleotide 5'-hydroxyl-kinase NOL9-like isoform X2 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
E7F654Polynucleotide 5'-hydroxyl-kinase NOL9 OS=Danio rerio OX=7955 GN=nol9 PE=3 SV=1
Q5SY16Polynucleotide 5'-hydroxyl-kinase NOL9 OS=Homo sapiens OX=9606 GN=NOL9 PE=1 SV=1
Q8VYP6Polynucleotide 5'-hydroxyl-kinase NOL9 OS=Arabidopsis thaliana OX=3702 GN=At5g11010 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16575CLP1_PmRNA cleavage and polyadenylation factor CLP1 P-loopDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR045116FamilyPolyribonucleotide 5-hydroxyl-kinase Clp1/Grc3Interproscan
IPR032319DomainPolyribonucleotide 5'-hydroxyl-kinase Clp1, P-loop domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12755CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1PInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000448Biological Processcleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0051731Molecular Functionpolynucleotide 5'-hydroxyl-kinase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06947GRC3, NOL9; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9EC:2.7.1.-
Ribosome biogenesisko03009deepkoala

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