Gene detail

Detailed information of evm.model.Chr02.560 in Hemicorallium imperiale

Genomic Location: Chr02:13564534...13601937
NR annotation: XP_022791047.1, rho GTPase-activating protein gacHH-like [Stylophora pistillata]
Species Hemicorallium imperiale · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Chr02.560 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9C8K7	F-box/kelch-repeat protein At1g51550 OS=Arabidopsis thaliana OX=3702 GN=At1g51550 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009263 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13418 all species →	Kelch_4	Galactose oxidase, central domain	Repeat	Interproscan
PF13964 all species →	Kelch_6	Kelch motif	Repeat	Interproscan
PF01344 all species →	Kelch_1	Kelch motif	Repeat	Interproscan
PF13854 all species →	Kelch_5	Kelch motif	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006652 all species →	Repeat	Kelch repeat type 1	Interproscan
IPR015915 all species →	Homologous_superfamily	Kelch-type beta propeller	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23244 all species →	KELCH REPEAT DOMAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Chr02.560.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.