Detailed information of evm.model.Chr03.1314 in Hemicorallium imperiale

Genomic Location: Chr03:19339695...19341969
NR annotation: CAB3992172.1, jerky homolog-like isoform X2 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr03.1314 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000242 (this species only)
Transcription factor familyHTH · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05225
all species →		HTH_psqhelix-turn-helix, Psq domainDomainInterproscan
PF03184
all species →		DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF00628
all species →		PHDPHD-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR011011
all species →		Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR050863
all species →		FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR019787
all species →		DomainZinc finger, PHD-fingerInterproscan
IPR001965
all species →		DomainZinc finger, PHD-typeInterproscan
IPR007889
all species →		DomainDNA binding HTH domain, Psq-typeInterproscan
IPR004875
all species →		DomainDDE superfamily endonuclease domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19303
all species →		TRANSPOSONInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr03.1314.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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