Genomic Location: Chr03:22017482...22027481
NR annotation: XP_028418842.1, uncharacterized protein LOC114544382 [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families
evm.model.Chr03.1512 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| A0A0R4IB93 | Ubiquitin carboxyl-terminal hydrolase 48 OS=Danio rerio OX=7955 GN=usp48 PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000545 (this species only) |
| Ubiquitin family | DUB|ULP|ULP · all ubiquitin genes in this species |
| Ubiquitin family | DUB|USP|USP · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02902 all species → | Peptidase_C48 | Ulp1 protease family, C-terminal catalytic domain | Domain | Interproscan |
| PF00443 all species → | UCH | Ubiquitin carboxyl-terminal hydrolase | Family | Interproscan |
| PF21599 all species → | ZSWIM3_N | Zinc finger SWIM domain-containing protein 3, N-terminal | Domain | Interproscan |
| PF00628 all species → | PHD | PHD-finger | Domain | Interproscan |
| PF21056 all species → | ZSWIM1-3_RNaseH-like | Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain | Domain | Interproscan |
| PF20784 all species → | DUF5575_C | DUF5575 C-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003653 all species → | Domain | Ulp1 protease family, C-terminal catalytic domain | Interproscan |
| IPR019787 all species → | Domain | Zinc finger, PHD-finger | Interproscan |
| IPR052579 all species → | Family | Zinc finger SWIM domain-containing protein | Interproscan |
| IPR001394 all species → | Domain | Peptidase C19, ubiquitin carboxyl-terminal hydrolase | Interproscan |
| IPR028889 all species → | Domain | Ubiquitin specific protease domain | Interproscan |
| IPR038765 all species → | Homologous_superfamily | Papain-like cysteine peptidase superfamily | Interproscan |
| IPR007527 all species → | Domain | Zinc finger, SWIM-type | Interproscan |
| IPR019786 all species → | Conserved_site | Zinc finger, PHD-type, conserved site | Interproscan |
| IPR001965 all species → | Domain | Zinc finger, PHD-type | Interproscan |
| IPR048325 all species → | Domain | ZSWIM3, N-terminal domain | Interproscan |
| IPR048324 all species → | Domain | ZSWIM1/3, RNaseH-like domain | Interproscan |
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR018200 all species → | Conserved_site | Ubiquitin specific protease, conserved site | Interproscan |
| IPR011011 all species → | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR049218 all species → | Domain | DUF5575, C-terminal domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR31569 all species → | SWIM-TYPE DOMAIN-CONTAINING PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0006508 all species → | Biological Process | proteolysis | Interproscan |
| GO:0008234 all species → | Molecular Function | cysteine-type peptidase activity | Interproscan |
| GO:0004843 all species → | Molecular Function | cysteine-type deubiquitinase activity | Interproscan |
| GO:0016579 all species → | Biological Process | protein deubiquitination | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
evm.model.Chr03.1512.
