Detailed information of evm.model.Chr03.1628 in Hemicorallium imperiale

Genomic Location: Chr03:23316779...23318264
NR annotation: CAB3979325.1, zinc finger BED domain-containing 1-like [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr03.1628 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000431 (this species only)
Transcription factor familyzf-BED · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02892
all species →		zf-BEDBED zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003656
all species →		DomainZinc finger, BED-typeInterproscan
IPR052035
all species →		FamilyZinc finger BED domain-containingInterproscan
IPR012337
all species →		Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036236
all species →		Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46481
all species →		ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K24637ZBED1; zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1)EC:2.3.2.-
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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