Detailed information of evm.model.Chr04.1016 in Hemicorallium imperiale

Genomic Location: Chr04:20998147...21001999
NR annotation: CAB3998112.1, HIRA isoform X2 [Paramuricea clavata]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr04.1016 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8QFR2Protein HIRA OS=Xenopus laevis OX=8355 GN=hira PE=1 SV=2
O42611Protein HIRA OS=Takifugu rubripes OX=31033 GN=hira PE=2 SV=1
P79987Protein HIRA OS=Gallus gallus OX=9031 GN=HIRA PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004897 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07569
all species →		HiraTUP1-like enhancer of splitFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR031120
all species →		FamilyWD repeat HIR1-likeInterproscan
IPR011494
all species →		DomainProtein HIRA-like, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13831
all species →		MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINSInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000417
all species →		Cellular ComponentHIR complexInterproscan
GO:0000790
all species →		Cellular ComponentchromatinInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006325
all species →		Biological Processchromatin organizationInterproscan
GO:0006336
all species →		Biological Processchromatin organizationInterproscan
GO:0006338
all species →		Biological Processchromatin remodelingInterproscan
GO:0006351
all species →		Biological ProcessDNA-templated transcriptionInterproscan
GO:0031491
all species →		Molecular Functionnucleosome bindingInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr04.1016.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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