Detailed information of evm.model.Chr04.1030 in Hemicorallium imperiale

Genomic Location: Chr04:21179375...21196824
NR annotation: CAB3995212.1, Heterogeneous nuclear ribonucleo L [Paramuricea clavata]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr04.1030 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
F1LQ48Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2
P14866Heterogeneous nuclear ribonucleoprotein L OS=Homo sapiens OX=9606 GN=HNRNPL PE=1 SV=2
Q8R081Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001688 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13893
all species →		RRM_5RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012677
all species →		Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR006536
all species →		FamilyHnRNP-L/PTBInterproscan
IPR000504
all species →		DomainRNA recognition motif domainInterproscan
IPR035979
all species →		Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15592
all species →		MATRIN 3/NUCLEAR PROTEIN 220-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006397
all species →		Biological ProcessmRNA processingInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0003729
all species →		Molecular FunctionmRNA bindingInterproscan
GO:0043484
all species →		Biological Processregulation of RNA splicingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr04.1030.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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