Detailed information of evm.model.Chr04.1088 in Hemicorallium imperiale

Genomic Location: Chr04:21726646...21740935
NR annotation: CAB3983638.1, phosphatase Slingshot homolog 2-like isoform X2 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr04.1088 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q76I76Protein phosphatase Slingshot homolog 2 OS=Homo sapiens OX=9606 GN=SSH2 PE=1 SV=1
Q5SW75Protein phosphatase Slingshot homolog 2 OS=Mus musculus OX=10090 GN=Ssh2 PE=1 SV=2
Q8WYL5Protein phosphatase Slingshot homolog 1 OS=Homo sapiens OX=9606 GN=SSH1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003902 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00782
all species →		DSPcDual specificity phosphatase, catalytic domainDomainInterproscan
PF08766
all species →		DEK_CDEK C terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029021
all species →		Homologous_superfamilyProtein-tyrosine phosphatase-likeInterproscan
IPR000340
all species →		DomainDual specificity phosphatase, catalytic domainInterproscan
IPR020422
all species →		DomainDual specificity protein phosphatase domainInterproscan
IPR000387
all species →		DomainTyrosine-specific protein phosphatases domainInterproscan
IPR014876
all species →		DomainDEK, C-terminalInterproscan
IPR043587
all species →		FamilyProtein phosphatase Slingshot-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45864
all species →		SLINGSHOT PROTEIN PHOSPHATASE HOMOLOGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016311
all species →		Biological ProcessdephosphorylationInterproscan
GO:0006470
all species →		Biological Processprotein dephosphorylationInterproscan
GO:0003779
all species →		Molecular Functionactin bindingInterproscan
GO:0004721
all species →		Molecular Functionphosphoprotein phosphatase activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0016791
all species →		Molecular Functionphosphatase activityInterproscan
GO:0030036
all species →		Biological Processactin cytoskeleton organizationInterproscan
GO:0030837
all species →		Biological Processnegative regulation of actin filament polymerizationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr04.1088.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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