Detailed information of evm.model.Chr04.1100 in Hemicorallium imperiale

Genomic Location: Chr04:21920332...21923914
NR annotation: MXQ98337.1, hypothetical protein [Bos mutus]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr04.1100 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3B7N1Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus OX=9913 GN=CHD1L PE=2 SV=1
Q86WJ1Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens OX=9606 GN=CHD1L PE=1 SV=3
F4J9M5Probable ATP-dependent DNA helicase CHR12 OS=Arabidopsis thaliana OX=3702 GN=CHR12 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000968 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00176
all species →		SNF2-rel_domSNF2-related domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000330
all species →		DomainSNF2, N-terminalInterproscan
IPR031053
all species →		FamilyChromodomain-helicase-DNA-binding protein 1-likeInterproscan
IPR038718
all species →		Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47157
all species →		CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1-LIKEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0140658
all species →		Molecular FunctionATP-dependent chromatin remodeler activityInterproscan
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan
GO:0003678
all species →		Molecular FunctionDNA helicase activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0006338
all species →		Biological Processchromatin remodelingInterproscan
GO:0006974
all species →		Biological ProcessDNA damage responseInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr04.1100.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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