Detailed information of evm.model.Chr04.1108 in Hemicorallium imperiale

Genomic Location: Chr04:22098511...22103356
NR annotation: XP_028400546.1, syntaxin-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr04.1108 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q16932Syntaxin OS=Aplysia californica OX=6500 PE=2 SV=1
Q5TX47Syntaxin-1A OS=Anopheles gambiae OX=7165 GN=Syx1A PE=1 SV=2
P61267Syntaxin-1B OS=Bos taurus OX=9913 GN=STX1B PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003048 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00804
all species →		SyntaxinSyntaxinDomainInterproscan
PF05739
all species →		SNARESNARE domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006011
all species →		DomainSyntaxin, N-terminal domainInterproscan
IPR045242
all species →		FamilySyntaxinInterproscan
IPR000727
all species →		DomainTarget SNARE coiled-coil homology domainInterproscan
IPR010989
all species →		Homologous_superfamilySNAREInterproscan
IPR006012
all species →		Conserved_siteSyntaxin/epimorphin, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19957
all species →		SYNTAXINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0000149
all species →		Molecular FunctionSNARE bindingInterproscan
GO:0005484
all species →		Molecular FunctionSNAP receptor activityInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0006887
all species →		Biological ProcessexocytosisInterproscan
GO:0006906
all species →		Biological Processvesicle fusionInterproscan
GO:0012505
all species →		Cellular Componentendomembrane systemInterproscan
GO:0016021
all species →		Cellular ComponentmembraneInterproscan
GO:0031201
all species →		Cellular ComponentSNARE complexInterproscan
GO:0048278
all species →		Biological Processvesicle dockingInterproscan
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr04.1108.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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