Gene detail

Detailed information of evm.model.Chr04.1122 in Hemicorallium imperiale

Genomic Location: Chr04:22257856...22268532
NR annotation: XP_028400302.1, probable serine racemase [Dendronephthya gigantea]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q54HH2	Serine racemase OS=Dictyostelium discoideum OX=44689 GN=srr PE=1 SV=1
A2XWA9	Serine racemase OS=Oryza sativa subsp. indica OX=39946 GN=OsI_16936 PE=3 SV=1
Q7XSN8	Serine racemase OS=Oryza sativa subsp. japonica OX=39947 GN=SERR PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00291	PALP	Pyridoxal-phosphate dependent enzyme	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001926	Domain	Tryptophan synthase beta chain-like, PALP domain	Interproscan
IPR036052	Homologous_superfamily	Tryptophan synthase beta chain-like, PALP domain superfamily	Interproscan
IPR000634	Binding_site	Serine/threonine dehydratase, pyridoxal-phosphate-binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43050	SERINE / THREONINE RACEMASE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006520	Biological Process	amino acid metabolic process	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0000287	Molecular Function	magnesium ion binding	Interproscan
GO:0003941	Molecular Function	L-serine ammonia-lyase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0018114	Molecular Function	threonine racemase activity	Interproscan
GO:0030378	Molecular Function	serine racemase activity	Interproscan
GO:0070179	Biological Process	D-serine biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12235	SRR; serine racemase	EC:5.1.1.18	D-Amino acid metabolism	ko00470	deepkoala