Detailed information of evm.model.Chr04.1128 in Hemicorallium imperiale

Genomic Location: Chr04:22372067...22376531
NR annotation: CAB3985530.1, caspase-3-like [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr04.1128 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
F1NV61Caspase-7 OS=Gallus gallus OX=9031 GN=CASP7 PE=3 SV=2
P55866Caspase-3 OS=Xenopus laevis OX=8355 GN=casp3 PE=2 SV=1
P42575Caspase-2 OS=Homo sapiens OX=9606 GN=CASP2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000405 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00656
all species →		Peptidase_C14Caspase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002138
all species →		DomainPeptidase C14, caspase non-catalytic subunit p10Interproscan
IPR029030
all species →		Homologous_superfamilyCaspase-like domain superfamilyInterproscan
IPR011600
all species →		DomainPeptidase C14, caspase domainInterproscan
IPR015917
all species →		DomainPeptidase C14A, caspase catalytic domainInterproscan
IPR001309
all species →		DomainPeptidase C14, p20 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10454
all species →		CASPASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006915
all species →		Biological Processapoptotic processInterproscan
GO:0043525
all species →		Biological Processpositive regulation of neuron apoptotic processInterproscan
GO:0097153
all species →		Molecular Functionobsolete cysteine-type endopeptidase activity involved in apoptotic processInterproscan
GO:0004197
all species →		Molecular Functioncysteine-type endopeptidase activityInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan
GO:0008234
all species →		Molecular Functioncysteine-type peptidase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02187CASP3; caspase 3EC:3.4.22.56
Peptidases and inhibitorsko01002deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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