Detailed information of evm.model.Chr04.1131 in Hemicorallium imperiale

Genomic Location: Chr04:22388253...22389595
NR annotation: CAB3989255.1, probable pyridoxal 5 -phosphate synthase subunit pdx2 isoform X4 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr04.1131 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8LAD0Probable pyridoxal 5'-phosphate synthase subunit PDX2 OS=Arabidopsis thaliana OX=3702 GN=PDX2 PE=1 SV=1
Q04F27Pyridoxal 5'-phosphate synthase subunit PdxT OS=Oenococcus oeni (strain ATCC BAA-331 / PSU-1) OX=203123 GN=pdxT PE=3 SV=1
Q03144Pyridoxal 5'-phosphate synthase subunit SNO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SNO1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009006 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01174
all species →		SNOSNO glutamine amidotransferase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002161
all species →		FamilyPyridoxal 5'-phosphate synthase subunit PdxT/SNOInterproscan
IPR029062
all species →		Homologous_superfamilyClass I glutamine amidotransferase-likeInterproscan
IPR021196
all species →		Conserved_sitePdxT/SNO family, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31559
all species →		PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNOInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004359
all species →		Molecular Functionglutaminase activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0008614
all species →		Biological Processpyridoxine metabolic processInterproscan
GO:0042819
all species →		Biological Processvitamin B6 biosynthetic processInterproscan
GO:0042823
all species →		Biological Processpyridoxal phosphate biosynthetic processInterproscan
GO:1903600
all species →		Cellular Componentglutaminase complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K08681pdxT, pdx2; pyridoxal 5'-phosphate synthase pdxT subunitEC:4.3.3.6
Vitamin B6 metabolismko00750deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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