Gene detail

Detailed information of evm.model.Chr04.1136 in Hemicorallium imperiale

Genomic Location: Chr04:22414489...22424202
NR annotation: CAB4002013.1, Matrix metallo ase-9 [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q28275	Fibronectin (Fragment) OS=Canis lupus familiaris OX=9615 GN=FN1 PE=2 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00090	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan
PF05270	AbfB	Alpha-L-arabinofuranosidase B (ABFB) domain	Domain	Interproscan
PF00040	fn2	Fibronectin type II domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000562	Domain	Fibronectin type II domain	Interproscan
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR036195	Homologous_superfamily	Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily	Interproscan
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR036943	Homologous_superfamily	Fibronectin type II domain superfamily	Interproscan
IPR007934	Domain	Alpha-L-arabinofuranosidase B, arabinose-binding domain	Interproscan
IPR013806	Homologous_superfamily	Kringle-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0046373	Biological Process	L-arabinose metabolic process	Interproscan
GO:0046556	Molecular Function	alpha-L-arabinofuranosidase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10178	TBX4; T-box protein 4	-	Transcription factors	ko03000	deepkoala