Detailed information of evm.model.Chr04.1155 in Hemicorallium imperiale

Genomic Location: Chr04:22596123...22597136
NR annotation: NP_001088907.1, dynein light chain LC8-type 2 S homeolog [Xenopus laevis]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr04.1155 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3MHR3Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1
Q96FJ2Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1
Q9D0M5Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002873 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01221
all species →		Dynein_lightDynein light chain type 1 DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001372
all species →		FamilyDynein light chain, type 1/2Interproscan
IPR037177
all species →		Homologous_superfamilyDynein light chain superfamilyInterproscan
IPR019763
all species →		Conserved_siteDynein light chain, type 1/2, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11886
all species →		DYNEIN LIGHT CHAINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005868
all species →		Cellular Componentcytoplasmic dynein complexInterproscan
GO:0007017
all species →		Biological Processmicrotubule-based processInterproscan
GO:0030286
all species →		Cellular Componentdynein complexInterproscan
GO:0045505
all species →		Molecular Functiondynein intermediate chain bindingInterproscan
GO:0005875
all species →		Cellular Componentmicrotubule associated complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10418DYNLL; dynein light chain LC8-type-Cytoskeleton proteinsko04812deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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