Gene detail

Detailed information of evm.model.Chr04.1163 in Hemicorallium imperiale

Genomic Location: Chr04:22697321...22703718
NR annotation: XP_028400614.1, N-lysine methyltransferase SETD6-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Chr04.1163 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
C0H8I2	N-lysine methyltransferase setd6 OS=Salmo salar OX=8030 GN=setd6 PE=2 SV=1
Q5ZK17	N-lysine methyltransferase SETD6 OS=Gallus gallus OX=9031 GN=SETD6 PE=2 SV=2
D3ZSK5	N-lysine methyltransferase SETD6 OS=Rattus norvegicus OX=10116 GN=Setd6 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004457 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00856 all species →	SET	SET domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050600 all species →	Family	SETD3/SETD6 methyltransferase	Interproscan
IPR036464 all species →	Homologous_superfamily	Rubisco LSMT, substrate-binding domain superfamily	Interproscan
IPR044430 all species →	Domain	SETD6, SET domain	Interproscan
IPR046341 all species →	Homologous_superfamily	SET domain superfamily	Interproscan
IPR001214 all species →	Domain	SET domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13271 all species →	UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0016279 all species →	Molecular Function	protein-lysine N-methyltransferase activity	Interproscan
GO:0018026 all species →	Biological Process	peptidyl-lysine monomethylation	Interproscan
GO:0018022 all species →	Biological Process	peptidyl-lysine methylation	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Chr04.1163.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.