Gene detail

Detailed information of evm.model.Chr04.1208 in Hemicorallium imperiale

Genomic Location: Chr04:23563330...23568444
NR annotation: CAB4001769.1, transcription elongation factor B polypeptide 2 [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
P62869	Elongin-B OS=Mus musculus OX=10090 GN=Elob PE=1 SV=1
P62870	Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1
Q15370	Elongin-B OS=Homo sapiens OX=9606 GN=ELOB PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_Other

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00240	ubiquitin	Ubiquitin family	Domain	Interproscan
PF06842	DUF1242	Protein of unknown function (DUF1242)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000626	Domain	Ubiquitin-like domain	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR009653	Family	Protein kish	Interproscan
IPR039049	Family	Elongin B	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13248	TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006368	Biological Process	transcription elongation by RNA polymerase II	Interproscan
GO:0030891	Cellular Component	VCB complex	Interproscan
GO:0070449	Cellular Component	elongin complex	Interproscan