Detailed information of evm.model.Chr04.1249 in Hemicorallium imperiale

Genomic Location: Chr04:24224196...24235285
NR annotation: XP_028400368.1, uncharacterized protein LOC114523591 [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr04.1249 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q95116Thrombospondin-2 OS=Bos taurus OX=9913 GN=THBS2 PE=2 SV=2
P35442Thrombospondin-2 OS=Homo sapiens OX=9606 GN=THBS2 PE=1 SV=2
Q03350Thrombospondin-2 OS=Mus musculus OX=10090 GN=Thbs2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000019 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090
all species →		TSP_1Thrombospondin type 1 domainDomainInterproscan
PF13385
all species →		Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR36963
all species →		HELICASEInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Chr04.1249. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr04.1249.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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