Detailed information of evm.model.Chr04.1266 in Hemicorallium imperiale

Genomic Location: Chr04:24509053...24519923
NR annotation: XP_046840549.1, uncharacterized protein LOC124434697 isoform X1 [Xenia sp. Carnegie-2017]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P18887DNA repair protein XRCC1 OS=Homo sapiens OX=9606 GN=XRCC1 PE=1 SV=3
Q9ESZ0DNA repair protein XRCC1 OS=Rattus norvegicus OX=10116 GN=Xrcc1 PE=1 SV=2
Q60596DNA repair protein XRCC1 OS=Mus musculus OX=10090 GN=Xrcc1 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|ZnF|UBZ

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01834XRCC1_NXRCC1 N terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002706DomainDNA-repair protein Xrcc1, N-terminalInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11370DNA-REPAIR PROTEIN XRCC1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006284Biological Processbase-excision repairInterproscan
GO:0000012Biological Processsingle strand break repairInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10803XRCC1; DNA-repair protein XRCC1-DNA repair and recombination proteinsko03400deepkoala

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