Detailed information of evm.model.Chr04.1287 in Hemicorallium imperiale

Genomic Location: Chr04:24883868...25029654
NR annotation: XP_028400587.1, trafficking protein particle complex subunit 11-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr04.1287 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7Z392Trafficking protein particle complex subunit 11 OS=Homo sapiens OX=9606 GN=TRAPPC11 PE=1 SV=2
Q5ZI89Trafficking protein particle complex subunit 11 OS=Gallus gallus OX=9031 GN=TRAPPC11 PE=2 SV=1
B2RXC1Trafficking protein particle complex subunit 11 OS=Mus musculus OX=10090 GN=Trappc11 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003086 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11817
all species →		Foie-gras_1Foie gras liver health family 1RepeatInterproscan
PF07919
all species →		GryzunGryzun, putative trafficking through GolgiFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021773
all species →		DomainTrafficking protein particle complex subunit 11Interproscan
IPR012880
all species →		DomainGryzun, putative trafficking through GolgiInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14374
all species →		FOIE GRASInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Chr04.1287. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K20308TRAPPC11; trafficking protein particle complex subunit 11-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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