Detailed information of evm.model.Chr04.1334 in Hemicorallium imperiale

Genomic Location: Chr04:25862279...25877139
NR annotation: XP_028400329.1, hepatocyte nuclear factor 1-beta-B-like isoform X1 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P22361Hepatocyte nuclear factor 1-alpha OS=Mus musculus OX=10090 GN=Hnf1a PE=1 SV=2
P15257Hepatocyte nuclear factor 1-alpha OS=Rattus norvegicus OX=10116 GN=Hnf1a PE=1 SV=1
P35680Hepatocyte nuclear factor 1-beta OS=Homo sapiens OX=9606 GN=HNF1B PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04814HNF-1_NHepatocyte nuclear factor 1 (HNF-1), N terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR044869DomainHNF-1, POU-specific (POUs) atypical domainInterproscan
IPR044866DomainHNF-1, dimerization domainInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR039066FamilyHepatocyte nuclear factor 1Interproscan
IPR010982Homologous_superfamilyLambda repressor-like, DNA-binding domain superfamilyInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR006899DomainHepatocyte nuclear factor 1, N-terminalInterproscan
IPR023219Homologous_superfamilyHepatocyte nuclear factor 1, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11568HEPATOCYTE NUCLEAR FACTOR 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0001889Biological Processliver developmentInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030073Biological Processinsulin secretionInterproscan
GO:0031016Biological Processpancreas developmentInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08036TCF1, HNF1A; transcription factor 1, hepatocyte nuclear factor 1-alpha-Transcription factorsko03000deepkoala

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