Detailed information of evm.model.Chr04.1370 in Hemicorallium imperiale

Genomic Location: Chr04:26934510...26939182
NR annotation: CAB4004951.1, carbohydrate deacetylase [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr04.1370 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A8MPS7Carbohydrate deacetylase OS=Homo sapiens OX=9606 GN=YDJC PE=1 SV=1
Q14BV6Carbohydrate deacetylase OS=Mus musculus OX=10090 GN=Ydjc PE=2 SV=2
Q569M2Carbohydrate deacetylase OS=Xenopus laevis OX=8355 GN=ydjc PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006942 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04794
all species →		YdjCYdjC-like proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006879
all species →		FamilyCarbohydrate deacetylase YdjC-likeInterproscan
IPR011330
all species →		Homologous_superfamilyGlycoside hydrolase/deacetylase, beta/alpha-barrelInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31609
all species →		YDJC DEACETYLASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0019213
all species →		Molecular Functiondeacetylase activityInterproscan
GO:0005975
all species →		Biological Processcarbohydrate metabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr04.1370.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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