Detailed information of evm.model.Chr04.1395 in Hemicorallium imperiale

Genomic Location: Chr04:27831437...27834162
NR annotation: CAB4036623.1, DNA oxidative demethylase ALKBH2 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr04.1395 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6NS38DNA oxidative demethylase ALKBH2 OS=Homo sapiens OX=9606 GN=ALKBH2 PE=1 SV=1
Q6P6J4DNA oxidative demethylase ALKBH2 OS=Mus musculus OX=10090 GN=Alkbh2 PE=1 SV=1
Q58DM4DNA oxidative demethylase ALKBH2 OS=Bos taurus OX=9913 GN=ALKBH2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007035 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13532
all species →		2OG-FeII_Oxy_22OG-Fe(II) oxygenase superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032852
all species →		FamilyDNA oxidative demethylase ALKBH2Interproscan
IPR027450
all species →		DomainAlpha-ketoglutarate-dependent dioxygenase AlkB-likeInterproscan
IPR037151
all species →		Homologous_superfamilyAlpha-ketoglutarate-dependent dioxygenase AlkB-like superfamilyInterproscan
IPR005123
all species →		DomainOxoglutarate/iron-dependent dioxygenaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31573
all species →		ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0006307
all species →		Biological ProcessDNA alkylation repairInterproscan
GO:0008198
all species →		Molecular Functionferrous iron bindingInterproscan
GO:0035511
all species →		Biological Processobsolete oxidative DNA demethylationInterproscan
GO:0043734
all species →		Molecular Functionobsolete DNA-N1-methyladenine dioxygenase activityInterproscan
GO:0051747
all species →		Molecular Functioncytosine C-5 DNA demethylase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr04.1395.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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