Detailed information of evm.model.Chr04.142 in Hemicorallium imperiale

Genomic Location: Chr04:2634291...2635757
NR annotation: ROL46693.1, Pogo transposable element with KRAB domain [Anabarilius grahami]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr04.142 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000155 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03184
all species →		DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF09607
all species →		BrkDBDBrinker DNA-binding domainDomainInterproscan
PF03221
all species →		HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006600
all species →		DomainHTH CenpB-type DNA-binding domainInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR010921
all species →		Homologous_superfamilyTrp repressor/replication initiatorInterproscan
IPR050863
all species →		FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR004875
all species →		DomainDDE superfamily endonuclease domainInterproscan
IPR018586
all species →		DomainBrinker DNA-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19303
all species →		TRANSPOSONInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0043565
all species →		Molecular Functionsequence-specific DNA bindingInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14537NUG2, GNL2; nuclear GTP-binding protein-Ribosome biogenesisko03009deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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