Detailed information of evm.model.Chr04.333 in Hemicorallium imperiale

Genomic Location: Chr04:5184434...5185471
NR annotation: CAB4020813.1, ATP-dependent DNA helicase hus2 rqh1, partial [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr04.333 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9FT69ATP-dependent DNA helicase Q-like SIM OS=Arabidopsis thaliana OX=3702 GN=RECQSIM PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000292 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271
all species →		Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF09382
all species →		RQCRQC domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001650
all species →		DomainHelicase, C-terminal domain-likeInterproscan
IPR018982
all species →		DomainRQC domainInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036388
all species →		Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13710
all species →		DNA HELICASE RECQ FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000724
all species →		Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005694
all species →		Cellular ComponentchromosomeInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006268
all species →		Biological ProcessDNA unwinding involved in DNA replicationInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0006310
all species →		Biological ProcessDNA recombinationInterproscan
GO:0009378
all species →		Molecular Functionfour-way junction helicase activityInterproscan
GO:0032508
all species →		Biological ProcessDNA duplex unwindingInterproscan
GO:0043138
all species →		Molecular Function3'-5' DNA helicase activityInterproscan
GO:0006260
all species →		Biological ProcessDNA replicationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr04.333.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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