Gene detail

Detailed information of evm.model.Chr04.749 in Hemicorallium imperiale

Genomic Location: Chr04:15901391...15946325
NR annotation: CAB4023378.1, Phthiocerol synthesis polyketide synthase type I, partial [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
I6XD69	Mycoketide-CoA synthase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=pks12 PE=1 SV=1
E0D203	Polyketide synthase GfsB OS=Streptomyces halstedii OX=1944 GN=gfsB PE=1 SV=1
E0D206	Polyketide synthase GfsE OS=Streptomyces halstedii OX=1944 GN=gfsE PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02801	Ketoacyl-synt_C	Beta-ketoacyl synthase, C-terminal domain	Domain	Interproscan
PF00698	Acyl_transf_1	Acyl transferase domain	Domain	Interproscan
PF00109	ketoacyl-synt	Beta-ketoacyl synthase, N-terminal domain	Domain	Interproscan
PF00975	Thioesterase	Thioesterase domain	Domain	Interproscan
PF09772	Tmem26	Transmembrane protein 26	Family	Interproscan
PF02460	Patched	Patched family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020841	Domain	Polyketide synthase, beta-ketoacyl synthase domain	Interproscan
IPR016036	Homologous_superfamily	Malonyl-CoA ACP transacylase, ACP-binding	Interproscan
IPR014031	Domain	Beta-ketoacyl synthase, C-terminal	Interproscan
IPR001227	Homologous_superfamily	Acyl transferase domain superfamily	Interproscan
IPR014043	Domain	Acyl transferase	Interproscan
IPR016035	Homologous_superfamily	Acyl transferase/acyl hydrolase/lysophospholipase	Interproscan
IPR050091	Family	Polyketide and Nonribosomal Peptide Biosynthesis Enzymes	Interproscan
IPR016039	Homologous_superfamily	Thiolase-like	Interproscan
IPR014030	Domain	Beta-ketoacyl synthase, N-terminal	Interproscan
IPR001031	Domain	Thioesterase	Interproscan
IPR029058	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR019169	Family	Transmembrane protein 26	Interproscan
IPR018201	Active_site	Beta-ketoacyl synthase, active site	Interproscan
IPR000731	Domain	Sterol-sensing domain	Interproscan
IPR003392	Family	Protein patched/dispatched	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43775	FATTY ACID SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016740	Molecular Function	transferase activity	Interproscan
GO:0004312	Molecular Function	fatty acid synthase activity	Interproscan
GO:0006633	Biological Process	fatty acid biosynthetic process	Interproscan
GO:0016746	Molecular Function	acyltransferase activity	Interproscan
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0004315	Molecular Function	3-oxoacyl-[acyl-carrier-protein] synthase activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan