Detailed information of evm.model.Chr04.768 in Hemicorallium imperiale

Genomic Location: Chr04:16317328...16397831
NR annotation: XP_028396415.1, vacuolar protein sorting-associated protein 53 homolog isoform X1 [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr04.768 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZLD7Vacuolar protein sorting-associated protein 53 homolog OS=Gallus gallus OX=9031 GN=VPS53 PE=2 SV=1
Q5R5J4Vacuolar protein sorting-associated protein 53 homolog OS=Pongo abelii OX=9601 GN=VPS53 PE=2 SV=2
Q5VIR6Vacuolar protein sorting-associated protein 53 homolog OS=Homo sapiens OX=9606 GN=VPS53 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004027 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04100
all species →		Vps53_NVps53, N-terminal RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039766
all species →		FamilyVacuolar protein sorting-associated protein 53Interproscan
IPR007234
all species →		DomainVps53, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12820
all species →		VACUOLAR SORTING PROTEIN 53Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000938
all species →		Cellular ComponentGARP complexInterproscan
GO:0042147
all species →		Biological Processretrograde transport, endosome to GolgiInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr04.768.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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