Detailed information of evm.model.Chr04.801 in Hemicorallium imperiale

Genomic Location: Chr04:17271692...17364220
NR annotation: CAB4005909.1, Sortilin-related receptor, partial [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr04.801 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q95209Sortilin-related receptor OS=Oryctolagus cuniculus OX=9986 GN=SORL1 PE=1 SV=1
Q92673Sortilin-related receptor OS=Homo sapiens OX=9606 GN=SORL1 PE=1 SV=2
O88307Sortilin-related receptor OS=Mus musculus OX=10090 GN=Sorl1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000636 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00041
all species →		fn3Fibronectin type III domainDomainInterproscan
PF15901
all species →		Sortilin_CSortilin, neurotensin receptor 3, C-terminalDomainInterproscan
PF15902
all species →		Sortilin-Vps10Sortilin, neurotensin receptor 3,RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036116
all species →		Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR006581
all species →		DomainVPS10Interproscan
IPR003961
all species →		DomainFibronectin type IIIInterproscan
IPR031777
all species →		DomainSortilin, C-terminalInterproscan
IPR050310
all species →		FamilyVPS10-related sortilin family receptorsInterproscan
IPR031778
all species →		DomainSortilin, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12106
all species →		SORTILIN RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0005794
all species →		Cellular ComponentGolgi apparatusInterproscan
GO:0006892
all species →		Biological Processpost-Golgi vesicle-mediated transportInterproscan
GO:0016021
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr04.801.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP