Detailed information of evm.model.Chr04.805 in Hemicorallium imperiale

Genomic Location: Chr04:17587491...17620504
NR annotation: CAB3995878.1, malectin-B-like isoform X1 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr04.805 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9DA08SAGA-associated factor 29 OS=Mus musculus OX=10090 GN=Sgf29 PE=1 SV=1
P0C606SAGA-associated factor 29 OS=Rattus norvegicus OX=10116 GN=Sgf29 PE=1 SV=1
Q96ES7SAGA-associated factor 29 OS=Homo sapiens OX=9606 GN=SGF29 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007173 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07039
all species →
SGF29_TudorSGF29 tudor-like domainDomainInterproscan
PF11721
all species →
MalectinMalectin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047288
all species →
DomainSAGA-associated factor 29, first Tudor domainInterproscan
IPR010750
all species →
DomainSGF29 tudor-like domainInterproscan
IPR047287
all species →
DomainSAGA-associated factor 29, second Tudor domainInterproscan
IPR039155
all species →
FamilyMalectinInterproscan
IPR021720
all species →
DomainMalectin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13460
all species →
UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0030246
all species →
Molecular Functioncarbohydrate bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr04.805.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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